Python eBooks
Bioinformatics with Python Cookbook
If you are either a computational biologist or a Python programmer, you will probably relate to the expression "explosive growth, exciting times". Python is arguably the main programming language for big data, and the deluge of data in biology, mostly from genomics and proteomics, makes bioinformatics one of the most exciting fields in data science. Using the hands-on recipes in this book, you'll be able to do practical research and analysis in computational biology with Python. We cover modern, next-generation sequencing libraries and explore real-world examples on how to handle real data. The main focus of the book is the practical application of bioinformatics, but we also cover modern programming techniques and frameworks to deal with the ever increasing deluge of bioinformatics data. ...
If you are either a computational biologist or a Python programmer, you will probably relate to the expression "explosive growth, exciting times". Python is arguably the main programming language for big data, and the deluge of data in biology, mostly from genomics and proteomics, makes bioinformatics one of the most exciting fields in data science. Using the hands-on recipes in this book, you'll be able to do practical research and analysis in computational biology with Python. We cover modern, next-generation sequencing libraries and explore real-world examples on how to handle real data. The main focus of the book is the practical application of bioinformatics, but we also cover modern programming techniques and frameworks to deal with the ever increasing deluge of bioinformatics data. ...
Essential SQLAlchemy, 2nd Edition
This new edition of Essential SQLAlchemy is the tool developers need to understand the technology. Rather than being a simple tutorial or API reference, this book builds an application step by step. This application is comprised of many of the most common usages of SQLAlchemy, thus showing how to manage complexity and engaging in real world examples. Using easy, common language, the authors teach you how to turn knowledge into usable work. ...
This new edition of Essential SQLAlchemy is the tool developers need to understand the technology. Rather than being a simple tutorial or API reference, this book builds an application step by step. This application is comprised of many of the most common usages of SQLAlchemy, thus showing how to manage complexity and engaging in real world examples. Using easy, common language, the authors teach you how to turn knowledge into usable work. ...
Building Web Applications with Python and Neo4j
Py2neo is a simple and pragmatic Python library that provides access to the popular graph database Neo4j via its RESTful web service interface. This brings with it a heavily refactored core, a cleaner API, better performance, and some new idioms. You will begin with licensing and installing Neo4j, learning the fundamentals of Cypher as a graph query language, and exploring Cypher optimizations. You will discover how to integrate with various Python frameworks such as Flask and its extensions: Py2neo, Neomodel, and Django. Finally, the deployment aspects of your Python-based Neo4j applications in a production environment is also covered. By sequentially working through the steps in each chapter, you will quickly learn and master the various implementation details and integrations of Python and Neo4j, helping you to develop your use cases more quickly. ...
Py2neo is a simple and pragmatic Python library that provides access to the popular graph database Neo4j via its RESTful web service interface. This brings with it a heavily refactored core, a cleaner API, better performance, and some new idioms. You will begin with licensing and installing Neo4j, learning the fundamentals of Cypher as a graph query language, and exploring Cypher optimizations. You will discover how to integrate with various Python frameworks such as Flask and its extensions: Py2neo, Neomodel, and Django. Finally, the deployment aspects of your Python-based Neo4j applications in a production environment is also covered. By sequentially working through the steps in each chapter, you will quickly learn and master the various implementation details and integrations of Python and Neo4j, helping you to develop your use cases more quickly. ...
Effective Computation in Physics
More physicists today are taking on the role of software developer as part of their research, but software development isn't always easy or obvious, even for physicists. This practical book teaches essential software development skills to help you automate and accomplish nearly any aspect of research in a physics-based field. Written by two PhDs in nuclear engineering, this book includes practical examples drawn from a working knowledge of physics concepts. You'll learn how to use the Python programming language to perform everything from collecting and analyzing data to building software and publishing your results. ...
More physicists today are taking on the role of software developer as part of their research, but software development isn't always easy or obvious, even for physicists. This practical book teaches essential software development skills to help you automate and accomplish nearly any aspect of research in a physics-based field. Written by two PhDs in nuclear engineering, this book includes practical examples drawn from a working knowledge of physics concepts. You'll learn how to use the Python programming language to perform everything from collecting and analyzing data to building software and publishing your results. ...
Mastering Python Forensics
Digital forensic analysis is the process of examining and extracting data digitally and examining it. Python has the combination of power, expressiveness, and ease of use that makes it an essential complementary tool to the traditional, off-the-shelf digital forensic tools. This book will teach you how to perform forensic analysis and investigations by exploring the capabilities of various Python libraries. The book starts by explaining the building blocks of the Python programming language, especially ctypes in-depth, along with how to automate typical tasks in file system analysis, common correlation tasks to discover anomalies, as well as templates for investigations. Next, we'll show you cryptographic algorithms that can be used during forensic investigations to check for known files or to compare suspicious files with online services such as VirusTotal or Mobile-Sandbox. ...
Digital forensic analysis is the process of examining and extracting data digitally and examining it. Python has the combination of power, expressiveness, and ease of use that makes it an essential complementary tool to the traditional, off-the-shelf digital forensic tools. This book will teach you how to perform forensic analysis and investigations by exploring the capabilities of various Python libraries. The book starts by explaining the building blocks of the Python programming language, especially ctypes in-depth, along with how to automate typical tasks in file system analysis, common correlation tasks to discover anomalies, as well as templates for investigations. Next, we'll show you cryptographic algorithms that can be used during forensic investigations to check for known files or to compare suspicious files with online services such as VirusTotal or Mobile-Sandbox. ...
NLTK Essentials
Natural Language Processing (NLP) is the field of artificial intelligence and computational linguistics that deals with the interactions between computers and human languages. With the instances of human-computer interaction increasing, it's becoming imperative for computers to comprehend all major natural languages. Natural Language Toolkit (NLTK) is one such powerful and robust tool. You start with an introduction to get the gist of how to build systems around NLP. We then move on to explore data science-related tasks, following which you will learn how to create a customized tokenizer and parser from scratch. Throughout, we delve into the essential concepts of NLP while gaining practical insights into various open source tools and libraries available in Python for NLP. You will then learn how to analyze social media sites to discover trending topics and perform sentiment analysis. Finally, you will see tools which will help you deal with large scale text. ...
Natural Language Processing (NLP) is the field of artificial intelligence and computational linguistics that deals with the interactions between computers and human languages. With the instances of human-computer interaction increasing, it's becoming imperative for computers to comprehend all major natural languages. Natural Language Toolkit (NLTK) is one such powerful and robust tool. You start with an introduction to get the gist of how to build systems around NLP. We then move on to explore data science-related tasks, following which you will learn how to create a customized tokenizer and parser from scratch. Throughout, we delve into the essential concepts of NLP while gaining practical insights into various open source tools and libraries available in Python for NLP. You will then learn how to analyze social media sites to discover trending topics and perform sentiment analysis. Finally, you will see tools which will help you deal with large scale text. ...
Professional Python
Professional Python goes beyond the basics to teach beginner- and intermediate-level Python programmers the little-known tools and constructs that build concise, maintainable code. Design better architecture and write easy-to-understand code using highly adoptable techniques that result in more robust and efficient applications. Coverage includes Decorators, Context Managers, Magic Methods, Class Factories, Metaclasses, Regular Expressions, and more, including advanced methods for unit testing using asyncio and CLI tools. Each topic includes an explanation of the concept and a discussion on applications, followed by hands-on tutorials based on real-world scenarios. The "Python 3 first" approach covers multiple current versions, while ensuring long-term relevance. Python offers many tools and techniques for writing better code, but often confusing documentation leaves many programmers in the dark about how to use them. This book shines a light on ...
Professional Python goes beyond the basics to teach beginner- and intermediate-level Python programmers the little-known tools and constructs that build concise, maintainable code. Design better architecture and write easy-to-understand code using highly adoptable techniques that result in more robust and efficient applications. Coverage includes Decorators, Context Managers, Magic Methods, Class Factories, Metaclasses, Regular Expressions, and more, including advanced methods for unit testing using asyncio and CLI tools. Each topic includes an explanation of the concept and a discussion on applications, followed by hands-on tutorials based on real-world scenarios. The "Python 3 first" approach covers multiple current versions, while ensuring long-term relevance. Python offers many tools and techniques for writing better code, but often confusing documentation leaves many programmers in the dark about how to use them. This book shines a light on ...
Programming Google App Engine with Python
This practical guide shows intermediate and advanced web and mobile app developers how to build highly scalable Python applications in the cloud with Google App Engine. The flagship of Google's Cloud Platform, App Engine hosts your app on infrastructure that grows automatically with your traffic, minimizing up-front costs and accommodating unexpected visitors. You'll learn hands-on how to perform common development tasks with App Engine services and development tools, including deployment and maintenance. App Engine's Python support includes a fast Python 2.7 interpreter, the standard library, and a WSGI-based runtime environment. Choose from many popular web application frameworks, including Django and Flask. ...
This practical guide shows intermediate and advanced web and mobile app developers how to build highly scalable Python applications in the cloud with Google App Engine. The flagship of Google's Cloud Platform, App Engine hosts your app on infrastructure that grows automatically with your traffic, minimizing up-front costs and accommodating unexpected visitors. You'll learn hands-on how to perform common development tasks with App Engine services and development tools, including deployment and maintenance. App Engine's Python support includes a fast Python 2.7 interpreter, the standard library, and a WSGI-based runtime environment. Choose from many popular web application frameworks, including Django and Flask. ...
Python 3 Object-oriented Programming, 2nd Edition
Python 3 is more versatile and easier to use than ever. It runs on all major platforms in a huge array of use cases. Coding in Python minimizes development time and increases productivity in comparison to other languages. Clean, maintainable code is easy to both read and write using Python's clear, concise syntax. Object-oriented programming is a popular design paradigm in which data and behaviors are encapsulated in such a way that they can be manipulated together. Many modern programming languages utilize the powerful concepts behind object-oriented programming and Python is no exception. Starting with a detailed analysis of object-oriented analysis and design, you will use the Python programming language to clearly grasp key concepts from the object-oriented paradigm. This book fully explains classes, data encapsulation, inheritance, polymorphism, abstraction, and exceptions with an emphasis on when you can use each principle to develop well-designe ...
Python 3 is more versatile and easier to use than ever. It runs on all major platforms in a huge array of use cases. Coding in Python minimizes development time and increases productivity in comparison to other languages. Clean, maintainable code is easy to both read and write using Python's clear, concise syntax. Object-oriented programming is a popular design paradigm in which data and behaviors are encapsulated in such a way that they can be manipulated together. Many modern programming languages utilize the powerful concepts behind object-oriented programming and Python is no exception. Starting with a detailed analysis of object-oriented analysis and design, you will use the Python programming language to clearly grasp key concepts from the object-oriented paradigm. This book fully explains classes, data encapsulation, inheritance, polymorphism, abstraction, and exceptions with an emphasis on when you can use each principle to develop well-designe ...
Think Python, 2nd Edition
If you want to learn how to program, working with Python is an excellent way to start. This hands-on guide takes you through the language a step at a time, beginning with basic programming concepts before moving on to functions, recursion, data structures, and object-oriented design. This second edition and its supporting code have been updated for Python 3. Through exercises in each chapter, you'll try out programming concepts as you learn them. Think Python is ideal for students at the high school or college level, as well as self-learners, home-schooled students, and professionals who need to learn programming basics. Beginners just getting their feet wet will learn how to start with Python in a browser. ...
If you want to learn how to program, working with Python is an excellent way to start. This hands-on guide takes you through the language a step at a time, beginning with basic programming concepts before moving on to functions, recursion, data structures, and object-oriented design. This second edition and its supporting code have been updated for Python 3. Through exercises in each chapter, you'll try out programming concepts as you learn them. Think Python is ideal for students at the high school or college level, as well as self-learners, home-schooled students, and professionals who need to learn programming basics. Beginners just getting their feet wet will learn how to start with Python in a browser. ...
Practical Data Science Cookbook
Starting with the basics, this book will cover how to set up your numerical programming environment, introduce you to the data science pipeline (an iterative process by which data science projects are completed), and guide you through several data projects in a step-by-step format. By sequentially working through the steps in each chapter, you will quickly familiarize yourself with the process and learn how to apply it to a variety of situations with examples in the two most popular programming languages for data analysis - R and Python. ...
Starting with the basics, this book will cover how to set up your numerical programming environment, introduce you to the data science pipeline (an iterative process by which data science projects are completed), and guide you through several data projects in a step-by-step format. By sequentially working through the steps in each chapter, you will quickly familiarize yourself with the process and learn how to apply it to a variety of situations with examples in the two most popular programming languages for data analysis - R and Python. ...